STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGARPMitochondria localized glutamic acid rich protein. (201 aa)    
Predicted Functional Partners:
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.732
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.717
ENSAPLP00000028245
Uncharacterized protein.
    
 0.706
FAM49B
Family with sequence similarity 49 member B.
      
 0.586
CENPN
Centromere protein N.
   
 0.581
ENSAPLP00000031682
Nfu_N domain-containing protein.
      
 0.558
CTDSPL2
CTD small phosphatase like 2.
      
 0.539
U3IUD0_ANAPP
JmjC domain-containing protein.
   
 0.519
ENSAPLP00000021740
TPR_REGION domain-containing protein.
   
 0.519
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.494
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.