STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCL1RNA terminal phosphate cyclase like 1. (385 aa)    
Predicted Functional Partners:
BMS1
BMS1 ribosome biogenesis factor.
   
 0.999
U3ISD0_ANAPP
Uncharacterized protein.
   
 
 0.996
WDR43
WD repeat domain 43.
   
 0.996
BYSL
Bystin like.
   
 
 0.994
UTP18
UTP18 small subunit processome component.
   
 0.992
UTP6
UTP6 small subunit processome component.
   
 
 0.991
HEATR1
HEAT repeat containing 1.
   
 0.990
ENSAPLP00000030905
Brix domain-containing protein.
   
 
 0.990
NOC4L
Nucleolar complex associated 4 homolog.
   
 
 0.988
WDR36
WD repeat domain 36.
   
 
 0.988
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.