STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000031373C2 domain-containing protein. (210 aa)    
Predicted Functional Partners:
ENSAPLP00000032550
Uncharacterized protein.
 
      0.898
ITCH
E3 ubiquitin-protein ligase.
 
  
 0.860
ENSAPLP00000023897
Uncharacterized protein.
    
 0.740
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.722
NEDD4
E3 ubiquitin-protein ligase.
 
  
 0.719
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.708
NUMB
NUMB endocytic adaptor protein.
    
 0.660
UBE2L3
Ubiquitin conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.643
SMAD7
Mothers against decapentaplegic homolog.
    
 0.640
SMAD6
Mothers against decapentaplegic homolog.
    
 0.612
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.