STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC4H2Zinc finger C4H2-type containing. (224 aa)    
Predicted Functional Partners:
RNF220
Ring finger protein 220.
    
 
 0.717
RAB39B
RAB39B, member RAS oncogene family.
      
 0.641
RLIM
Ring finger protein, LIM domain interacting.
    
 
 0.633
MFSD12
Uncharacterized protein.
      
 0.630
TMEM132E
Transmembrane protein 132E.
      
 0.628
NEXMIF
Neurite extension and migration factor.
      
 0.621
SLC9A6
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.611
THOC2
THO complex 2.
      
 0.611
PIGA
Phosphatidylinositol glycan anchor biosynthesis class A.
      
 0.603
EIF2S3
Tr-type G domain-containing protein.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.