STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000031406RING-type domain-containing protein. (172 aa)    
Predicted Functional Partners:
TRAIP
Uncharacterized protein.
 
      0.888
U3I6F1_ANAPP
Uncharacterized protein.
 
      0.642
NEIL3
Nei like DNA glycosylase 3.
   
  
 0.618
FANCD2
Uncharacterized protein.
   
 
 0.565
CDC45
Cell division cycle 45.
   
  
 0.563
MON1A
MON1 homolog A, secretory trafficking associated.
      
 0.499
SPRTN
SprT-like N-terminal domain.
      
 0.499
CDHR4
Uncharacterized protein.
      
 0.433
FANCM
FA complementation group M.
      
 0.432
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.