STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D8TBC1 domain family member 8. (1145 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
   
 
  0.908
DIPK1C
Divergent protein kinase domain 1C.
      
 0.885
LONRF2
LON peptidase N-terminal domain and ring finger 2.
      
 0.748
IPCEF1
PH domain-containing protein.
      
 0.747
LONRF3
LON peptidase N-terminal domain and ring finger 3.
      
 0.691
RNF149
Ring finger protein 149.
 
    
 0.635
CHST10
Carbohydrate sulfotransferase.
      
 0.634
PDCL3
Phosducin like 3.
      
 0.619
RPL31
Uncharacterized protein.
      
 0.609
ENSAPLP00000016913
Uncharacterized protein.
      
 0.609
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.