STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUNE2Prune homolog 2 with BCH domain. (2848 aa)    
Predicted Functional Partners:
MAP6
Microtubule associated protein 6.
      
 0.620
ADGRD2
Uncharacterized protein.
      
 0.611
SPTY2D1
SPT2 chromatin protein domain containing 1.
      
 0.611
CDCP2
CUB domain containing protein 2.
      
 0.610
OTUD7A
OTU deubiquitinase 7A.
      
 0.586
ENSAPLP00000017931
Uncharacterized protein.
     
 0.561
APRT
Adenine phosphoribosyltransferase.
     
 0.561
FBXL21P
F-box domain-containing protein.
      
 0.558
CEP78
Centrosomal protein 78.
      
 0.548
PI15
Peptidase inhibitor 15; Belongs to the CRISP family.
      
 0.542
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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