STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HECW2HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2. (1566 aa)    
Predicted Functional Partners:
ENSAPLP00000023897
Uncharacterized protein.
    
 0.771
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.751
ZBTB21
Zinc finger and BTB domain containing 21.
    
 0.741
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.721
SYNE1
Uncharacterized protein.
     
 0.675
CASQ2
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
    
 0.672
PSMD4
Proteasome 26S subunit, non-ATPase 4.
    
 0.656
SMAD4
Mothers against decapentaplegic homolog.
   
 0.648
TULP4
TUB like protein 4.
    
 
 0.648
KLHL2
Kelch like family member 2.
   
 
 0.645
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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