STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF628Zinc finger protein 628. (1161 aa)    
Predicted Functional Partners:
RUNDC1
RUN domain containing 1.
      
 0.818
TMF1
TATA element modulatory factor 1.
      
 0.748
TAF5
TATA-box binding protein associated factor 5.
    
 0.703
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.632
ATM
Non-specific serine/threonine protein kinase.
   
 0.610
CKAP5
Cytoskeleton associated protein 5.
    
 
 0.601
ENSAPLP00000020099
TOG domain-containing protein.
    
 
 0.601
RWDD2B
RWD domain containing 2B.
    
 
 0.547
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.