STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGER3Prostaglandin E receptor 3. (374 aa)    
Predicted Functional Partners:
PTGER2
Prostaglandin E receptor 2; Belongs to the G-protein coupled receptor 1 family.
     
0.913
GNA11
G protein subunit alpha 11.
    
 0.744
HTR2B
5-hydroxytryptamine receptor 2B.
      
 0.544
GNB1
G protein subunit beta 1.
    
 0.520
GNB4
G protein subunit beta 4.
    
 0.520
C8orf37
Chromosome 8 open reading frame 37.
      
 0.518
HTR1F
5-hydroxytryptamine receptor 1F.
      
 0.483
HTR7
5-hydroxytryptamine receptor 7.
      
 0.475
GLRA2
Glycine receptor alpha 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.457
PTGS2
Prostaglandin-endoperoxide synthase 2.
      
 0.453
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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