STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000031673KASH domain-containing protein. (911 aa)    
Predicted Functional Partners:
ENSAPLP00000028933
Uncharacterized protein.
 
     0.942
ENSAPLP00000021697
Uncharacterized protein.
 
     0.941
SYNE1
Uncharacterized protein.
 
     0.935
ENSAPLP00000025742
Uncharacterized protein.
 
     0.934
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.791
ENSAPLP00000024046
Uncharacterized protein.
 
    
 0.717
CLMN
Calmin.
 
      0.650
ENSAPLP00000023732
Uncharacterized protein.
 
 
  
0.618
LMNB2
Lamin B2; Belongs to the intermediate filament family.
    
 0.495
ENSAPLP00000020757
Uncharacterized protein.
    
 0.421
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.