STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFIL3Nuclear factor, interleukin 3 regulated. (435 aa)    
Predicted Functional Partners:
PER2
Period circadian regulator 2.
   
 0.860
PER3
Period circadian regulator 3.
   
 0.844
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
   
 0.755
NPAS2
Neuronal PAS domain protein 2.
    
 0.666
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
 0.654
CLOCK
Clock circadian regulator.
    
 0.641
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.639
CRY1
Cryptochrome circadian regulator 1.
   
  
 0.621
CRY2
Cryptochrome circadian regulator 2.
   
  
 0.620
BATF3
Basic leucine zipper ATF-like transcription factor 3.
   
 0.620
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.