STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFC3H1Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
U3J964_ANAPP
Uncharacterized protein.
 
     0.918
MTREX
Mtr4 exosome RNA helicase.
    
 
 0.852
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.698
PAPOLG
Poly(A) polymerase gamma.
   
 
 0.694
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
      
 0.610
RBM7
RRM domain-containing protein.
      
 0.609
ZCCHC8
Zinc finger CCHC-type containing 8.
      
 0.609
DDX60
DExD/H-box helicase 60.
    
 
 0.600
IPO7
Importin 7.
    
 
 0.600
IPO8
Importin 8.
    
 
 0.600
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.