STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMXL1Dmx like 1. (3065 aa)    
Predicted Functional Partners:
ROGDI
Rogdi atypical leucine zipper.
    
 
 0.833
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 
 0.762
ATP6V1E1
Uncharacterized protein.
    
 
 0.705
WDR7
WD repeat domain 7.
   
 
 0.688
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
 
 0.668
ATP6V1B2
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 
 0.658
ENSAPLP00000023507
ATP-synt_ab domain-containing protein.
    
 
 0.658
ZNF507
Zinc finger protein 507.
   
 
 0.634
RPS6KA3
Non-specific serine/threonine protein kinase.
   
  
 0.610
ARHGEF7
Rho guanine nucleotide exchange factor 7.
      
 0.610
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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