STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH18Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins. (790 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.660
JUP
Junction plakoglobin.
    
 0.625
LZTS1
Leucine zipper tumor suppressor 1.
      
 0.586
TELO2
Telomere maintenance 2.
    
 
 0.566
ENSAPLP00000030011
Uncharacterized protein.
      
 0.555
STXBP6
Syntaxin binding protein 6.
      
 0.548
TMEM215
Transmembrane protein 215.
   
    0.508
ARVCF
ARVCF delta catenin family member.
   
 0.505
U3IGZ7_ANAPP
Uncharacterized protein.
   
 0.505
ENSAPLP00000019540
Uncharacterized protein.
   
 0.505
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.