STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSPH4ARadial spoke head 6 homolog A. (647 aa)    
Predicted Functional Partners:
RSPH1
Radial spoke head component 1.
   
 
 0.939
RSPH9
Radial spoke head 9 homolog.
   
 
 0.934
CCNO
Cyclin O; Belongs to the cyclin family.
    
 0.822
RSPH3
Radial spoke head 3.
  
 
 0.806
NUP214
Nucleoporin 214.
    
 0.804
ENSAPLP00000018291
PPIase cyclophilin-type domain-containing protein.
   
 
 0.793
ENSAPLP00000020532
RanBD1 domain-containing protein.
   
 
 0.793
ENSAPLP00000021030
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.793
ENSAPLP00000028965
RanBD1 domain-containing protein.
   
 
 0.793
ENSAPLP00000030249
RanBD1 domain-containing protein.
   
 
 0.793
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.