STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARF1Scavenger receptor class F member 1. (866 aa)    
Predicted Functional Partners:
GAS6
Growth arrest specific 6.
     
 0.474
ENSAPLP00000028581
Folate_rec domain-containing protein.
     
 0.468
TMEM19
Transmembrane protein 19.
      
 0.439
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
  
 0.436
U3IN57_ANAPP
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
  
 0.436
TYRO3
TYRO3 protein tyrosine kinase.
    
 0.435
MERTK
Uncharacterized protein.
    
 0.434
ENSAPLP00000023833
BaffR-Tall_bind domain-containing protein.
    
 0.418
C7
Complement C7.
   
  0.409
CALR
Calreticulin.
     
 0.405
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.