STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSI1Musashi RNA binding protein 1. (417 aa)    
Predicted Functional Partners:
MSI2
Uncharacterized protein.
 
   
  0.976
ENSAPLP00000018555
RRM domain-containing protein.
 
     
0.899
CSTF2
Cleavage stimulation factor subunit 2.
  
 
 0.798
ZC3H14
Zinc finger CCCH-type containing 14.
    
 
 0.701
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
  
 0.610
TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1.
  
 0.608
RMC1
Regulator of MON1-CCZ1.
      
 0.593
TNPO1
Transportin 1.
   
 
 0.593
SRSF2
RRM domain-containing protein.
  
 
 0.581
TRA2A
Transformer 2 alpha homolog.
  
 
 0.581
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.