STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000032387Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
ENSAPLP00000024705
EHD_N domain-containing protein.
      
 0.609
U3IVH5_ANAPP
RNAse_Pc domain-containing protein; Belongs to the pancreatic ribonuclease family.
    
   0.523
TXNIP
Thioredoxin interacting protein.
     
 0.522
U3IBK2_ANAPP
Uncharacterized protein.
   
 0.487
RIPK2
Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains.
   
 0.487
CASQ2
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
    
 0.483
USP14
Ubiquitin carboxyl-terminal hydrolase.
    
 0.479
SUGT1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.479
MAVS
CARD_2 domain-containing protein.
    
 0.475
U3J1K3_ANAPP
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.471
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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