STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB12Ankyrin repeat and SOCS box containing 12. (318 aa)    
Predicted Functional Partners:
ZDHHC15
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.709
LIMS1
Uncharacterized protein.
    
 0.662
TMPRSS9
Transmembrane serine protease 9; Belongs to the peptidase S1 family.
    
 0.642
KSR1
Protein kinase domain-containing protein.
    
 0.630
PTER
Phosphotriesterase related; Belongs to the metallo-dependent hydrolases superfamily. Phosphotriesterase family.
     
 0.627
ACP2
Acid phosphatase 2, lysosomal; Belongs to the histidine acid phosphatase family.
    
 0.625
ASB6
Ankyrin repeat and SOCS box containing 6.
  
  
 0.618
COMMD8
COMM domain containing 8.
   
  0.602
ASB2
Ankyrin repeat and SOCS box containing 2.
  
 
0.589
COMMD1
Copper metabolism domain containing 1.
    
  0.587
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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