STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF2Polycomb group ring finger 2. (446 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.990
CBX4
Chromobox 4.
    
 0.982
CBX2
Chromobox 2.
    
 0.980
RNF2
Ring finger protein 2.
   
0.976
PHC1
Polyhomeotic homolog 1.
    
 0.953
SCMH1
Scm polycomb group protein homolog 1.
    
 0.945
BMI1
RING-type domain-containing protein.
  
  
0.931
RYBP
RING1 and YY1 binding protein.
    
 0.899
KDM2B
Lysine demethylase 2B.
   
 0.890
CBX6
Chromobox 6.
    
 0.882
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.