STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000032859ZnMc domain-containing protein. (471 aa)    
Predicted Functional Partners:
MMP13
Matrix metallopeptidase 13.
  
 
0.887
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.855
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.792
ENSAPLP00000031324
Uncharacterized protein.
    
 
 0.693
COL3A1
Uncharacterized protein.
   
 0.663
COL1A1
Collagen type I alpha 1 chain.
   
 0.663
TIMP4
TIMP metallopeptidase inhibitor 4.
    
 0.647
ACAN
Aggrecan.
    
 0.642
IL6
Uncharacterized protein.
   
 
 0.642
DCN
Decorin; May affect the rate of fibrils formation.
   
 0.637
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.