STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN36507.1Phage-related holin (Lysis protein). (261 aa)    
Predicted Functional Partners:
CUN36405.1
Phage-related minor tail protein.
       0.806
CUN36422.1
Phage-related minor tail protein.
       0.806
CUN36280.1
Bacteriophage head-tail adaptor.
  
   0.795
CUN36267.1
Phage gp6-like head-tail connector protein.
   
   0.792
CUN36250.1
Predicted phage phi-C31 gp36 major capsid-like protein.
   
   0.791
CUN36212.1
Phage portal protein%2C HK97 family.
   
   0.787
CUN36478.1
Uncharacterised protein.
       0.773
CUN36489.1
Uncharacterised protein.
       0.773
CUN36437.1
Uncharacterised protein.
       0.763
CUN36456.1
Phage-related protein.
      0.763
Your Current Organism:
Dorea longicatena
NCBI taxonomy Id: 88431
Other names: CCUG 45247, D. longicatena, DSM 13814, Dorea longicatena Taras et al. 2002, Eubacterium sp. III-35, JCM 11232, strain 111-35
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