Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUN37667.1 | CUN38207.1 | ERS852423_00223 | ERS852423_00249 | Glyoxalase-like domain. | Protein of uncharacterised function (DUF2992). | 0.546 |
CUN38169.1 | CUN38186.1 | ERS852423_00246 | ERS852423_00247 | Uncharacterised protein. | Uncharacterised protein. | 0.933 |
CUN38169.1 | CUN38207.1 | ERS852423_00246 | ERS852423_00249 | Uncharacterised protein. | Protein of uncharacterised function (DUF2992). | 0.414 |
CUN38186.1 | CUN38169.1 | ERS852423_00247 | ERS852423_00246 | Uncharacterised protein. | Uncharacterised protein. | 0.933 |
CUN38186.1 | CUN38207.1 | ERS852423_00247 | ERS852423_00249 | Uncharacterised protein. | Protein of uncharacterised function (DUF2992). | 0.414 |
CUN38207.1 | CUN37667.1 | ERS852423_00249 | ERS852423_00223 | Protein of uncharacterised function (DUF2992). | Glyoxalase-like domain. | 0.546 |
CUN38207.1 | CUN38169.1 | ERS852423_00249 | ERS852423_00246 | Protein of uncharacterised function (DUF2992). | Uncharacterised protein. | 0.414 |
CUN38207.1 | CUN38186.1 | ERS852423_00249 | ERS852423_00247 | Protein of uncharacterised function (DUF2992). | Uncharacterised protein. | 0.414 |
CUN38207.1 | CUN38225.1 | ERS852423_00249 | ERS852423_00250 | Protein of uncharacterised function (DUF2992). | Uncharacterised protein. | 0.590 |
CUN38207.1 | CUN83847.1 | ERS852423_00249 | ERS852423_01568 | Protein of uncharacterised function (DUF2992). | Uncharacterised protein. | 0.466 |
CUN38207.1 | rho | ERS852423_00249 | ERS852423_00185 | Protein of uncharacterised function (DUF2992). | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.468 |
CUN38225.1 | CUN38207.1 | ERS852423_00250 | ERS852423_00249 | Uncharacterised protein. | Protein of uncharacterised function (DUF2992). | 0.590 |
CUN83847.1 | CUN38207.1 | ERS852423_01568 | ERS852423_00249 | Uncharacterised protein. | Protein of uncharacterised function (DUF2992). | 0.466 |
rho | CUN38207.1 | ERS852423_00185 | ERS852423_00249 | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Protein of uncharacterised function (DUF2992). | 0.468 |