STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN38417.1ABC-type transport system involved in multi-copper enzyme maturation%2C permease component. (356 aa)    
Predicted Functional Partners:
metN_1
Methionine import ATP-binding protein MetN.
  
  0.924
CUN38436.1
Uncharacterised protein.
      0.796
CUN71714.1
Uncharacterised protein.
  
 
 0.755
CUN86561.1
Uncharacterized conserved protein%2C contains FHA domain.
  
 0.685
metN_2
Methionine import ATP-binding protein MetN.
  
 0.685
metN_3
Methionine import ATP-binding protein MetN.
  
  0.680
drrA
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
   
  0.671
ecfA1_2
Energy-coupling factor transporter ATP-binding protein EcfA 1.
   
  0.671
ybhF_1
Uncharacterized ABC transporter ATP-binding protein YbhF.
   
  0.671
ybhF_2
Uncharacterized ABC transporter ATP-binding protein YbhF.
   
  0.671
Your Current Organism:
Dorea longicatena
NCBI taxonomy Id: 88431
Other names: CCUG 45247, D. longicatena, DSM 13814, Dorea longicatena Taras et al. 2002, Eubacterium sp. III-35, JCM 11232, strain 111-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.