STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN63067.1Uncharacterized protein conserved in bacteria. (103 aa)    
Predicted Functional Partners:
yrrK
Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
    0.745
CUO05208.1
Protein of uncharacterised function (DUF1292).
  
     0.735
CUN57872.1
Uncharacterised protein.
  
     0.680
CUO05265.1
Uncharacterized protein conserved in bacteria; Belongs to the UPF0297 family.
  
  
 0.665
CUO33586.1
Uncharacterised protein.
  
     0.629
CUO06896.1
Uncharacterised protein.
  
     0.602
CUN79810.1
Uncharacterised protein.
  
     0.597
CUN34393.1
Spore germination protein.
  
     0.589
CUO20142.1
Haloalkane dehalogenase.
  
     0.573
CUN94512.1
Uncharacterised protein.
  
     0.570
Your Current Organism:
Dorea longicatena
NCBI taxonomy Id: 88431
Other names: CCUG 45247, D. longicatena, DSM 13814, Dorea longicatena Taras et al. 2002, Eubacterium sp. III-35, JCM 11232, strain 111-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.