STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grdEGlycine reductase complex component B subunits alpha and beta. (426 aa)    
Predicted Functional Partners:
grdB
Glycine reductase complex component B subunit gamma.
 
  
 0.972
CUN73091.1
Uncharacterised protein.
 
   
 0.933
grdA1
Glycine/sarcosine/betaine reductase complex component A1.
 
   
 0.903
grdC
Glycine/sarcosine/betaine reductase complex component C subunit beta.
 
   
 0.863
grdD
Glycine/sarcosine/betaine reductase complex component C subunit alpha.
 
   
 0.862
grdA
Glycine/sarcosine/betaine reductase complex component A.
 
     0.862
trxA_1
Thioredoxin; Belongs to the thioredoxin family.
 
   
 0.670
trxB_1
Thioredoxin reductase.
 
  
 0.624
prdB
D-proline reductase subunit gamma.
 
  
 0.567
prdA_2
D-proline reductase proprotein prdA.
 
  
 0.463
Your Current Organism:
Dorea longicatena
NCBI taxonomy Id: 88431
Other names: CCUG 45247, D. longicatena, DSM 13814, Dorea longicatena Taras et al. 2002, Eubacterium sp. III-35, JCM 11232, strain 111-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.