STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpA_3Sn-glycerol-3-phosphate transport system permease protein ugpA. (287 aa)    
Predicted Functional Partners:
ugpC_2
Sn-glycerol-3-phosphate import ATP-binding protein UgpC.
 
 0.989
ycjP_3
Inner membrane ABC transporter permease protein ycjP.
 0.986
CUN77830.1
Glycerol-3-phosphate transporter periplasmic binding protein.
 
 0.959
ycjP_6
Inner membrane ABC transporter permease protein ycjP.
 
 0.954
ycjP_4
Inner membrane ABC transporter permease protein ycjP.
 0.947
ugpC_3
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
 0.946
ugpC_1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
 0.940
ycjP_5
Inner membrane ABC transporter permease protein ycjP.
 0.939
ycjP_1
Inner membrane ABC transporter permease protein ycjP.
 
 0.924
ycjP_2
Inner membrane ABC transporter permease protein ycjP.
 
 0.924
Your Current Organism:
Dorea longicatena
NCBI taxonomy Id: 88431
Other names: CCUG 45247, D. longicatena, DSM 13814, Dorea longicatena Taras et al. 2002, Eubacterium sp. III-35, JCM 11232, strain 111-35
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.