STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_9Macrolide export ATP-binding/permease protein MacB. (252 aa)    
Predicted Functional Partners:
gsiA
Glutathione import ATP-binding protein GsiA.
 
    
0.918
CUO00127.1
FtsX-like permease family.
 
   0.907
CUN34138.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
     
0.899
CUN37973.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
     
0.899
yheH
Probable multidrug resistance ABC transporter ATP-binding/permease protein YheH.
 
     
0.899
CUN90615.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
     
0.898
CUO36849.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
     
0.895
irtA_1
Iron import ATP-binding/permease protein IrtA.
 
     
0.894
irtA_2
Iron import ATP-binding/permease protein IrtA.
 
     
0.894
CUN90583.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
     
0.869
Your Current Organism:
Dorea longicatena
NCBI taxonomy Id: 88431
Other names: CCUG 45247, D. longicatena, DSM 13814, Dorea longicatena Taras et al. 2002, Eubacterium sp. III-35, JCM 11232, strain 111-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.