STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO00523.1PD-(D/E)XK nuclease family transposase. (277 aa)    
Predicted Functional Partners:
CUN50209.1
Uncharacterised protein.
  
     0.667
CUN92686.1
Uncharacterised protein.
  
     0.655
CUN50327.1
Uncharacterised protein.
  
     0.589
iap
Probable endopeptidase p60 precursor.
  
     0.581
CUN50439.1
Uncharacterised protein.
  
     0.562
nagH
Hyaluronoglucosaminidase precursor.
  
     0.532
sacA_2-2
Predicted outer membrane protein.
  
     0.483
CUN51937.1
PD-(D/E)XK nuclease family transposase.
  
     0.480
uvrD
DNA helicase II.
  
     0.451
CUN92767.1
Putative accessory gene regulator protein; Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide.
  
     0.409
Your Current Organism:
Dorea longicatena
NCBI taxonomy Id: 88431
Other names: CCUG 45247, D. longicatena, DSM 13814, Dorea longicatena Taras et al. 2002, Eubacterium sp. III-35, JCM 11232, strain 111-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.