Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO12989.1 | CUO13046.1 | ERS852423_02353 | ERS852423_02355 | Putative transporter YfdV. | Uncharacterised protein. | 0.430 |
CUO12989.1 | maeB | ERS852423_02353 | ERS852423_00184 | Putative transporter YfdV. | NADP-dependent malic enzyme. | 0.636 |
CUO12989.1 | mepA_15 | ERS852423_02353 | ERS852423_02352 | Putative transporter YfdV. | Multidrug export protein mepA. | 0.515 |
CUO12989.1 | patB_2 | ERS852423_02353 | ERS852423_02354 | Putative transporter YfdV. | Cystathionine beta-lyase PatB. | 0.539 |
CUO13046.1 | CUO12989.1 | ERS852423_02355 | ERS852423_02353 | Uncharacterised protein. | Putative transporter YfdV. | 0.430 |
CUO13046.1 | patB_2 | ERS852423_02355 | ERS852423_02354 | Uncharacterised protein. | Cystathionine beta-lyase PatB. | 0.603 |
maeB | CUO12989.1 | ERS852423_00184 | ERS852423_02353 | NADP-dependent malic enzyme. | Putative transporter YfdV. | 0.636 |
mepA_15 | CUO12989.1 | ERS852423_02352 | ERS852423_02353 | Multidrug export protein mepA. | Putative transporter YfdV. | 0.515 |
mepA_15 | patB_2 | ERS852423_02352 | ERS852423_02354 | Multidrug export protein mepA. | Cystathionine beta-lyase PatB. | 0.447 |
patB_2 | CUO12989.1 | ERS852423_02354 | ERS852423_02353 | Cystathionine beta-lyase PatB. | Putative transporter YfdV. | 0.539 |
patB_2 | CUO13046.1 | ERS852423_02354 | ERS852423_02355 | Cystathionine beta-lyase PatB. | Uncharacterised protein. | 0.603 |
patB_2 | mepA_15 | ERS852423_02354 | ERS852423_02352 | Cystathionine beta-lyase PatB. | Multidrug export protein mepA. | 0.447 |