STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO30879.1CRISPR-associated endoribonuclease Cas6. (249 aa)    
Predicted Functional Partners:
CUO30856.1
CRISPR-associated protein Cas10/Csm1%2C subtype III-A/MTUBE.
 
  
 0.968
CUO30796.1
CRISPR type III-A/MTUBE-associated RAMP protein Csm3.
 
   
 0.960
CUO30749.1
CRISPR type III-A/MTUBE-associated RAMP protein Csm5.
 
   
 0.955
CUO30768.1
CRISPR type III-A/MTUBE-associated RAMP protein Csm4.
 
   
 0.955
CUO30698.1
CRISPR-associated endoribonuclease Cas2.
 
   
 0.845
CUO30826.1
CRISPR type III-A/MTUBE-associated protein Csm2.
     
 0.837
CUO30722.1
CRISPR-associated endonuclease Cas1.
 
  
 0.814
CUO30905.1
Uncharacterised protein family (UPF0150).
       0.503
Your Current Organism:
Dorea longicatena
NCBI taxonomy Id: 88431
Other names: CCUG 45247, D. longicatena, DSM 13814, Dorea longicatena Taras et al. 2002, Eubacterium sp. III-35, JCM 11232, strain 111-35
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.