Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSACDP00005008634 | ENSACDP00005017456 | ENSACDP00005008634 | ENSACDP00005017456 | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | annotation not available | 0.832 |
ENSACDP00005008634 | NIPBL | ENSACDP00005008634 | ENSACDP00005002390 | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | LOW QUALITY PROTEIN: nipped-B-like protein. | 0.832 |
ENSACDP00005008634 | PDS5A | ENSACDP00005008634 | ENSACDP00005001541 | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | Sister chromatid cohesion protein PDS5 homolog A isoform X1. | 0.841 |
ENSACDP00005008634 | PDS5B | ENSACDP00005008634 | ENSACDP00005024229 | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | Sister chromatid cohesion protein PDS5 homolog B. | 0.841 |
ENSACDP00005008634 | RAD21 | ENSACDP00005008634 | ENSACDP00005004696 | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | Double-strand-break repair protein rad21 homolog. | 0.967 |
ENSACDP00005008634 | RAD21L1 | ENSACDP00005008634 | ENSACDP00005020843 | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | Double-strand-break repair protein rad21-like protein 1 isoform X1. | 0.970 |
ENSACDP00005008634 | SMC1B | ENSACDP00005008634 | ENSACDP00005019943 | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | Structural maintenance of chromosomes protein 1B isoform X1. | 0.990 |
ENSACDP00005008634 | SMC3 | ENSACDP00005008634 | ENSACDP00005009180 | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6). | 0.995 |
ENSACDP00005008634 | STAG1 | ENSACDP00005008634 | ENSACDP00005010530 | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | Cohesin subunit SA-1 isoform X1. | 0.914 |
ENSACDP00005008634 | STAG2 | ENSACDP00005008634 | ENSACDP00005022677 | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | Cohesin subunit SA-2 isoform X1. | 0.914 |
ENSACDP00005017456 | ENSACDP00005008634 | ENSACDP00005017456 | ENSACDP00005008634 | annotation not available | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | 0.832 |
ENSACDP00005017456 | PDS5A | ENSACDP00005017456 | ENSACDP00005001541 | annotation not available | Sister chromatid cohesion protein PDS5 homolog A isoform X1. | 0.855 |
ENSACDP00005017456 | PDS5B | ENSACDP00005017456 | ENSACDP00005024229 | annotation not available | Sister chromatid cohesion protein PDS5 homolog B. | 0.840 |
ENSACDP00005017456 | RAD21 | ENSACDP00005017456 | ENSACDP00005004696 | annotation not available | Double-strand-break repair protein rad21 homolog. | 0.873 |
ENSACDP00005017456 | RAD21L1 | ENSACDP00005017456 | ENSACDP00005020843 | annotation not available | Double-strand-break repair protein rad21-like protein 1 isoform X1. | 0.873 |
ENSACDP00005017456 | SMC1B | ENSACDP00005017456 | ENSACDP00005019943 | annotation not available | Structural maintenance of chromosomes protein 1B isoform X1. | 0.947 |
ENSACDP00005017456 | SMC3 | ENSACDP00005017456 | ENSACDP00005009180 | annotation not available | Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6). | 0.952 |
ENSACDP00005017456 | STAG1 | ENSACDP00005017456 | ENSACDP00005010530 | annotation not available | Cohesin subunit SA-1 isoform X1. | 0.832 |
ENSACDP00005017456 | STAG2 | ENSACDP00005017456 | ENSACDP00005022677 | annotation not available | Cohesin subunit SA-2 isoform X1. | 0.832 |
NIPBL | ENSACDP00005008634 | ENSACDP00005002390 | ENSACDP00005008634 | LOW QUALITY PROTEIN: nipped-B-like protein. | LOW QUALITY PROTEIN: cohesin subunit SA-2-like. | 0.832 |
page 1 of 6