STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPTC7Protein phosphatase PTC7 homolog. (297 aa)    
Predicted Functional Partners:
STK16
Serine/threonine kinase 16.
   
  
 0.483
CDA
Cytidine deaminase.
   
 
 0.478
PDP2
Pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial.
    
 
 0.473
PDP1
Pyruvate dehyrogenase phosphatase catalytic subunit 1.
    
 
 0.473
ZER1
Zyg-11 protein homolog.
      
 0.471
MED31
Mediator of RNA polymerase II transcription subunit 31 isoform X1.
    
  0.448
MED7
Mediator of RNA polymerase II transcription subunit 7.
    
  0.434
MED21
Mediator of RNA polymerase II transcription subunit 21.
    
  0.434
MED14
Mediator of RNA polymerase II transcription subunit 14.
    
  0.434
PLEK2
Pleckstrin-2.
      
 0.430
Your Current Organism:
Anser cygnoides
NCBI taxonomy Id: 8845
Other names: A. cygnoides, Chinese goose, Swan goose, white Chinese goose
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