STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPDL3ALOW QUALITY PROTEIN: acid sphingomyelinase-like phosphodiesterase 3a. (462 aa)    
Predicted Functional Partners:
SHISAL1
Uncharacterized protein KIAA1644 homolog isoform X1.
      
 0.606
CEP104
Centrosomal protein of 104 kDa isoform X1.
      
 0.588
ERCC6L
LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like.
      
 0.568
BRINP1
BMP/retinoic acid-inducible neural-specific protein 1 isoform X1.
      
 0.560
LLGL2
Lethal(2) giant larvae protein homolog 2 isoform X1.
      
 0.556
DNASE1L3
Deoxyribonuclease 1 like 3.
      
 0.528
SQRDL
Sulfide:quinone oxidoreductase, mitochondrial isoform X1.
      
 0.480
HMG20B
High mobility group 20B.
      
 0.467
CDC40
Pre-mRNA-processing factor 17 isoform X1.
      
 0.465
CEMIP2
Cell surface hyaluronidase.
      
 0.465
Your Current Organism:
Anser cygnoides
NCBI taxonomy Id: 8845
Other names: A. cygnoides, Chinese goose, Swan goose, white Chinese goose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.