STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASKCalcium/calmodulin-dependent serine protein kinase. (911 aa)    
Predicted Functional Partners:
APBA1
LOW QUALITY PROTEIN: amyloid beta A4 precursor protein-binding family A member 1.
   
 0.989
APBA2
Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.
   
 0.984
APBA3
Amyloid beta A4 precursor protein-binding family A member 3.
   
 0.984
LIN7C
Protein lin-7 homolog C.
    
 0.978
URM1
Ubiquitin related modifier 1.
    
 0.978
ENSACDP00005024126
annotation not available
    
 0.978
LIN7A
Protein lin-7 homolog A.
    
 0.978
GRIN1
LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1.
   
 0.961
ENSACDP00005002856
annotation not available
   
 0.890
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.890
Your Current Organism:
Anser cygnoides
NCBI taxonomy Id: 8845
Other names: A. cygnoides, Chinese goose, Swan goose, white Chinese goose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.