STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF11E3 ubiquitin-protein ligase RNF11. (154 aa)    
Predicted Functional Partners:
ITCH
E3 ubiquitin-protein ligase Itchy homolog.
    
 0.803
UBE2N
Ubiquitin-conjugating enzyme E2 N isoform X1.
   
 0.782
SMURF2
E3 ubiquitin-protein ligase SMURF2.
    
 0.729
TAX1BP1
Tax1-binding protein 1 isoform X1.
   
 
 0.694
TNFAIP3
Tumor necrosis factor alpha-induced protein 3 isoform X1.
   
 
 0.655
ENSACDP00005007914
GON-4-like protein isoform X1.
    
 
 0.608
ENSACDP00005023146
annotation not available
   
 0.546
SMURF1
E3 ubiquitin-protein ligase SMURF1 isoform X1.
    
 0.492
CYLD
Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.
   
  
 0.467
HBP1
HMG box transcription factor 1.
      
 0.465
Your Current Organism:
Anser cygnoides
NCBI taxonomy Id: 8845
Other names: A. cygnoides, Chinese goose, Swan goose, white Chinese goose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.