STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUV39H2[histone H3]-lysine9 N-trimethyltransferase SUV39H. (406 aa)    
Predicted Functional Partners:
CBX3
Chromobox protein homolog 3.
   
0.930
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.910
SUZ12
Polycomb protein SUZ12.
   
 0.884
DDB1
DNA damage-binding protein 1.
    
 0.880
SIRT1
NAD+-dependent protein deacetylase sirtuin 1.
    
 0.878
CDYL2
LOW QUALITY PROTEIN: chromodomain Y-like protein 2.
   
 0.860
CDYL
Chromodomain Y-like protein isoform X1.
   
 0.860
EED
Polycomb protein EED.
    
 0.836
CBX1
Chromobox protein homolog 1 isoform X1.
   
0.822
CBX5
Chromobox 5.
   
0.822
Your Current Organism:
Anser cygnoides
NCBI taxonomy Id: 8845
Other names: A. cygnoides, Chinese goose, Swan goose, white Chinese goose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.