STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM12666.1PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; overlaps another CDS with the same product name. (342 aa)    
Predicted Functional Partners:
EHM12668.1
Putative cobalamin binding protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family.
 
 0.965
EHM12667.1
Putative metal-binding protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
 
    0.946
EHM12664.1
PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; overlaps another CDS with the same product name.
 
    
0.839
EHM12665.1
PFAM: Uroporphyrinogen decarboxylase (URO-D); overlaps another CDS with the same product name.
 
    
0.839
EHM12498.1
uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase.
  
 
 0.831
EHM13663.1
Putative GTPase, G3E family; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain.
 
  
 0.610
EHM13827.1
PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
  
 
  0.588
hemC
Porphobilinogen deaminase/precorrin-6x reductase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.585
EHM13292.1
Putative secreted protein; PFAM: Protein of unknown function (DUF523).
  
     0.562
EHM13352.1
PFAM: Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family.
  
     0.527
Your Current Organism:
Jonquetella anthropi
NCBI taxonomy Id: 885272
Other names: J. anthropi DSM 22815, Jonquetella anthropi ADV 126, Jonquetella anthropi DSM 22815, Jonquetella anthropi str. DSM 22815, Jonquetella anthropi strain DSM 22815
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