STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM12810.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
EHM12809.1
TRAP-type C4-dicarboxylate transport system, large permease component; PFAM: Na+/H+ antiporter family.
       0.799
EHM12811.1
PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
       0.748
EHM12808.1
Hypothetical protein.
       0.563
EHM12807.1
Dipeptidase; PFAM: Peptidase family C69.
       0.409
Your Current Organism:
Jonquetella anthropi
NCBI taxonomy Id: 885272
Other names: J. anthropi DSM 22815, Jonquetella anthropi ADV 126, Jonquetella anthropi DSM 22815, Jonquetella anthropi str. DSM 22815, Jonquetella anthropi strain DSM 22815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.