STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM13306.1ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (230 aa)    
Predicted Functional Partners:
EHM13304.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 0.997
EHM13305.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 0.992
EHM13308.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.986
EHM13310.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.975
EHM13303.1
PFAM: Predicted membrane protein (DUF2318).
 
    0.948
EHM13307.1
Major membrane immunogen, membrane-anchored lipoprotein; PFAM: FMN-binding domain.
 
     0.936
EHM13302.1
PFAM: Fe2+ transport protein.
 
   0.911
EHM13375.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
 
 
 0.874
EHM13301.1
High-affinity Fe2+/Pb2+ permease; PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein.
 
  
 0.867
EHM12776.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
   
 0.860
Your Current Organism:
Jonquetella anthropi
NCBI taxonomy Id: 885272
Other names: J. anthropi DSM 22815, Jonquetella anthropi ADV 126, Jonquetella anthropi DSM 22815, Jonquetella anthropi str. DSM 22815, Jonquetella anthropi strain DSM 22815
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.