STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM13834.1Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family. (389 aa)    
Predicted Functional Partners:
EHM13070.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
 
 0.971
EHM13693.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein.
 
 
 0.912
EHM13835.1
Putative Zn-dependent protease; PFAM: Putative neutral zinc metallopeptidase.
       0.780
EHM12581.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
 
 0.769
EHM13527.1
PFAM: Acetyltransferase (GNAT) family.
  
 0.720
EHM13058.1
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).
 0.706
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.625
EHM13837.1
tRNA/rRNA cytosine-C5-methylase; PFAM: NOL1/NOP2/sun family; NusB family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.598
EHM13135.1
PFAM: NAD dependent epimerase/dehydratase family.
  
 
 0.590
EHM13838.1
Hypothetical protein; PFAM: PASTA domain.
       0.590
Your Current Organism:
Jonquetella anthropi
NCBI taxonomy Id: 885272
Other names: J. anthropi DSM 22815, Jonquetella anthropi ADV 126, Jonquetella anthropi DSM 22815, Jonquetella anthropi str. DSM 22815, Jonquetella anthropi strain DSM 22815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.