STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEBP1Adipocyte enhancer-binding protein 1. (1011 aa)    
Predicted Functional Partners:
GAK
Cyclin-G-associated kinase.
    
  0.977
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
    
  0.644
LRRC15
Leucine-rich repeat-containing protein 15.
    
 0.609
FMOD
Fibromodulin.
   
 
 0.583
IGF2R
Cation-independent mannose-6-phosphate receptor.
     
 0.546
SORT1
Proteasome endopeptidase complex.
     
 0.543
SHISA3
Protein shisa-3 like protein.
      
 0.539
TRIL
TLR4 interactor with leucine rich repeats.
    
 0.525
CPB1
Carboxypeptidase B.
     
 0.469
LRRTM4
Leucine-rich repeat transmembrane neuronal protein 4.
     
 0.463
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.