STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNIP3TNFAIP3-interacting protein 3. (361 aa)    
Predicted Functional Partners:
TNF
Tumor necrosis factor; Belongs to the tumor necrosis factor family.
    
 
 0.885
TNFAIP3
Tumor necrosis factor alpha-induced protein 3.
    
 0.817
OTUD7B
OTU domain-containing protein 7B.
    
 0.696
OTUD7A
OTU domain-containing protein 7A.
    
 0.696
ZRANB1
Ubiquitin thioesterase Zranb1.
    
 0.696
VCPIP1
Deubiquitinating protein VCIP135.
    
 0.696
OPTN
Optineurin.
    
 0.634
IKBKG
NF-kappa-B essential modulator.
    
 0.634
TNFRSF25
Tumor necrosis factor receptor superfamily member 25.
    
   0.439
PLEKHG5
Pleckstrin homology and RhoGEF domain containing G5.
    
   0.439
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.