STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFDAP00000013242annotation not available (372 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase domain-containing protein 1.
    
  0.816
ASB7
Ankyrin repeat and SOCS box protein 7.
   
   0.620
GTF3C3
General transcription factor 3C polypeptide 3.
   
 0.591
KCTD2
BTB/POZ domain-containing protein KCTD2.
    
 0.567
SUFU
SUFU negative regulator of hedgehog signaling.
    
  0.556
LAMTOR2
Ragulator complex protein LAMTOR2.
    
  0.554
BARD1
BRCA1-associated RING domain protein 1.
    
  0.550
MRPS11
28S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family.
    
  0.546
MRPS15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
  0.545
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.545
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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