Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DKC1 | ENSFDAP00000004001 | ENSFDAP00000014913 | ENSFDAP00000004001 | H/ACA ribonucleoprotein complex subunit 4. | annotation not available | 0.988 |
DKC1 | FBL | ENSFDAP00000014913 | ENSFDAP00000023337 | H/ACA ribonucleoprotein complex subunit 4. | Fibrillarin. | 0.993 |
DKC1 | FBLL1 | ENSFDAP00000014913 | ENSFDAP00000010723 | H/ACA ribonucleoprotein complex subunit 4. | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | 0.993 |
DKC1 | NOLC1 | ENSFDAP00000014913 | ENSFDAP00000017500 | H/ACA ribonucleoprotein complex subunit 4. | Nucleolar and coiled-body phosphoprotein 1. | 0.985 |
DKC1 | NOP56 | ENSFDAP00000014913 | ENSFDAP00000021835 | H/ACA ribonucleoprotein complex subunit 4. | NOP56 ribonucleoprotein. | 0.999 |
DKC1 | Nop58 | ENSFDAP00000014913 | ENSFDAP00000018029 | H/ACA ribonucleoprotein complex subunit 4. | Nucleolar protein 58. | 0.988 |
DKC1 | POLR1A | ENSFDAP00000014913 | ENSFDAP00000004492 | H/ACA ribonucleoprotein complex subunit 4. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.898 |
DKC1 | POLR1B | ENSFDAP00000014913 | ENSFDAP00000022620 | H/ACA ribonucleoprotein complex subunit 4. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.718 |
DKC1 | RSL1D1 | ENSFDAP00000014913 | ENSFDAP00000001438 | H/ACA ribonucleoprotein complex subunit 4. | Ribosomal L1 domain-containing protein 1. | 0.956 |
DKC1 | TRUB1 | ENSFDAP00000014913 | ENSFDAP00000020851 | H/ACA ribonucleoprotein complex subunit 4. | TruB pseudouridine synthase family member 1. | 0.514 |
ENSFDAP00000004001 | DKC1 | ENSFDAP00000004001 | ENSFDAP00000014913 | annotation not available | H/ACA ribonucleoprotein complex subunit 4. | 0.988 |
ENSFDAP00000004001 | FBL | ENSFDAP00000004001 | ENSFDAP00000023337 | annotation not available | Fibrillarin. | 0.995 |
ENSFDAP00000004001 | FBLL1 | ENSFDAP00000004001 | ENSFDAP00000010723 | annotation not available | rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. | 0.993 |
ENSFDAP00000004001 | NOLC1 | ENSFDAP00000004001 | ENSFDAP00000017500 | annotation not available | Nucleolar and coiled-body phosphoprotein 1. | 0.977 |
ENSFDAP00000004001 | NOP56 | ENSFDAP00000004001 | ENSFDAP00000021835 | annotation not available | NOP56 ribonucleoprotein. | 0.998 |
ENSFDAP00000004001 | POLR1A | ENSFDAP00000004001 | ENSFDAP00000004492 | annotation not available | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.882 |
ENSFDAP00000004001 | POLR1B | ENSFDAP00000004001 | ENSFDAP00000022620 | annotation not available | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.866 |
ENSFDAP00000004001 | RSL1D1 | ENSFDAP00000004001 | ENSFDAP00000001438 | annotation not available | Ribosomal L1 domain-containing protein 1. | 0.987 |
ENSFDAP00000004001 | TRUB1 | ENSFDAP00000004001 | ENSFDAP00000020851 | annotation not available | TruB pseudouridine synthase family member 1. | 0.959 |
FBL | DKC1 | ENSFDAP00000023337 | ENSFDAP00000014913 | Fibrillarin. | H/ACA ribonucleoprotein complex subunit 4. | 0.993 |
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