STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFKB1Nuclear factor NF-kappa-B p105 subunit. (894 aa)    
Predicted Functional Partners:
RELA
Transcription factor p65.
   
0.998
NFKBIA
NF-kappa-B inhibitor alpha.
   
0.997
RELB
RELB proto-oncogene, NF-kB subunit.
   
0.996
REL
Proto-oncogene c-Rel.
   
0.994
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta.
   
 0.992
MAP3K8
Mitogen-activated protein kinase kinase kinase 8.
   
 0.987
NFKB2
Nuclear factor kappa B subunit 2.
  
0.987
NFKBIB
NF-kappa-B inhibitor beta.
   
0.985
CEACAM16
Carcinoembryonic antigen-related cell adhesion molecule 16.
   
 0.984
KPNA4
Importin subunit alpha; Functions in nuclear protein import.
    
 0.982
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.