STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRYBA4Beta-crystallin A4; Belongs to the beta/gamma-crystallin family. (175 aa)    
Predicted Functional Partners:
H920_14806
Beta-crystallin B1; Belongs to the beta/gamma-crystallin family.
  
   0.679
Bfsp1
Filensin.
      
 0.634
Cryaa
Crystallin alpha A.
   
 
 0.625
GJA3
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
  
   
 0.593
CRYGA
Crystallin gamma A.
  
  
 0.500
LOC104856592
Gamma-crystallin C-like.
  
  
 0.471
AIPL1
Aryl-hydrocarbon-interacting protein-like 1.
      
 0.430
DGCR2
Integral membrane protein DGCR2/IDD.
      
 0.418
NXPH3
Neurexophilin 3.
  
     0.407
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.