STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24465.1PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; manually curated. (80 aa)    
Predicted Functional Partners:
AGA24783.1
Transposase.
  
     0.774
AGA24950.1
Transposase.
  
     0.774
AGA26514.1
Transposase.
  
     0.774
AGA26522.1
Transposase.
  
     0.774
AGA27823.1
Transposase.
  
     0.774
AGA28136.1
Transposase.
  
     0.774
AGA28139.1
Transposase.
  
     0.774
AGA28893.1
Transposase.
  
     0.774
AGA30147.1
Transposase.
  
     0.774
AGA31543.1
Transposase.
  
     0.774
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.