STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24469.1PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain. (632 aa)    
Predicted Functional Partners:
AGA24467.1
Hypothetical protein.
       0.773
AGA24468.1
Hypothetical protein.
       0.773
AGA26090.1
ParB-like partition protein; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
  
 
 0.694
AGA27946.1
Putative transcriptional regulator; PFAM: DNA methylase; ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins.
  
 
 0.694
AGA30920.1
Putative transcriptional regulator; PFAM: ParB-like nuclease domain.
  
 
 0.694
AGA31519.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
  
     0.674
AGA30700.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C.
  
     0.660
AGA28666.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; WD40-like Beta Propeller Repeat.
  
     0.657
AGA27021.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
  
     0.656
AGA29741.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; WD40-like Beta Propeller Repeat.
  
     0.647
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.